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| Position | Top player | Team ranking | Top prospect | Organizational ranking | Overall ranking |
|---|---|---|---|---|---|
| Catchers | David Terkeurst | 9th | Jon Lipscomb | 1st | 5th |
| First Basemen | Jody McCauley | 3rd | Danny Contreras | Tied for 6th | 2nd |
| Second Basemen | Danny Ortiz | 10th | Lazaro Vicente | 5th | 8th |
| Third Basemen | Marco Estrada | 1st | Luis Martinez | Tied for 11th | 1st |
| Shortstops | Aaron Jeffers | 16th | Alejandro Lopez | 5th | 10th |
| Left Fielders | Matt Lamons | 13th | Santiago Talavera | 4th | 12th |
| Center Fielders | Brian Williams | 7th | Jeff Uhlig | 6th | 5th |
| Right Fielders | Luke Spradley | 1st | Tied for 14th | 11th | |
| Starting Pitchers | Jason Scothorn | 10th | Alex Ciriaco | 11th | 11th |
| Relievers | Alex Bacio | 16th | Miguel Padilla | 4th | 12th |
| Closers | Davy MacEachern | 14th | Jonathan Phillips | Tied for 10th | 11th |
