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| Position | Top player | Team ranking | Top prospect | Organizational ranking | Overall ranking |
|---|---|---|---|---|---|
| Catchers | Omar Valdivia | 8th | Jerry Madsen | Tied for 6th | 7th |
| First Basemen | Billy Olson | 1st | 16th | 16th | |
| Second Basemen | Dustin Dudley | 4th | Dustin Dudley | 6th | 5th |
| Third Basemen | Kevin Mars | 4th | Evan Phenix | Tied for 9th | 4th |
| Shortstops | Mike Hieronymus | 16th | Brandon McCampbell | 6th | 9th |
| Left Fielders | Jay Wesner | 10th | Trajano Buffington | 14th | 15th |
| Center Fielders | Nick Kepler | 11th | Doug McDermott | Tied for 13th | 13th |
| Right Fielders | Jason Engels | 3rd | Tied for 15th | 15th | |
| Starting Pitchers | Nick Rennie | 5th | Keegan Maguire | 5th | 2nd |
| Relievers | Noe Fina | 15th | Noe Fina | 11th | 13th |
| Closers | Justin Schwartz | 10th | Noe Fina | 6th | 7th |
